blog: #!/perl/bioinfo
postal address
Laboratorio de Biología Computacional, Estación Experimental de Aula Dei / CSIC, Av. Montañana 1.005, 50059 Zaragoza (Spain)
phone (+34) 976716089
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rutas en bicicleta de Zaragoza al campus de Aula Dei |
- discovery of regulatory motifs recognized by transcription factors using structural, evolutionary and genomic knowledge (STREG)
- analysis of genetic regulation in plants, in collaboration with Ana Casas and Ernesto Igartua
- design and genome-scale selection of phylogenetic markers for metagenomic studies, in collaboration with Pablo Vinuesa and Inmaculada Yruela
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footprint of dimeric complex 2bam_AB |
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A few active transcriptional subnetworks in Escherichia coli (details here) |
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ML tree of plant-like FADS proteins (details here) |
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Multiple interface alignment of zinc fingers (details here) |
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DNAPROT algorithm (details here) |
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structure-based position weight matrix for Escherichia coli FNR, modelled with TFmodeller |
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comparative model of a protein-DNA complex |
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conceptual model of evolutionary role of binding specificity in bacterial regulatory networks |
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genomic benchmark of primers4clades |
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congruence of tree topologies derived from single and concatenated loci of Bradyrhizobium |
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benchmark of fragment-based comparative modelling approaches |