laboratory of computational biology

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Postal address
Laboratorio de Biología Computacional, Estación Experimental de Aula Dei / CSIC, Av. Montañana 1.005, 50059 Zaragoza (Spain)


bicilogo rutas en bicicleta de Zaragoza al campus de Aula Dei
Research topics/objetivos del labo
  • discovery of regulatory motifs recognized by transcription factors using structural, evolutionary and genomic knowledge (STREG)
  • analysis of regulatory networks in plants
  • design and genome-scale selection of phylogenetic markers for metagenomic studies, in collaboration with Pablo Vinuesa

footprint of dimeric complex 2bam_AB
(enzyme BamHI)

3D-footprint superfamily cloud

DNAPROT algorithm (details here)

structure-based position weight matrix for Escherichia coli FNR, modelled with TFmodeller
(read more here)

comparative model of a protein-DNA complex
(read more here)

conceptual model of evolutionary role of binding specificity in bacterial regulatory networks
(read more here)

genomic benchmark of primers4clades
(read more here)

congruence of tree topologies derived from single and concatenated loci of Bradyrhizobium
(read more here)

benchmark of fragment-based comparative modelling approaches
(read more here)